• P-ISSN 0974-6846 E-ISSN 0974-5645

Indian Journal of Science and Technology

Article

Indian Journal of Science and Technology

Year: 2024, Volume: 17, Issue: 23, Pages: 2412-2420

Original Article

Enzyme Profiling of Petroleum Hydrocarbon-Degrading Bacteria Isolated from Oil Contaminated Soils

Received Date:12 April 2024, Accepted Date:18 May 2024, Published Date:03 June 2024

Abstract

Objectives: The main objective of this study was to evaluate the activity of enzymes with hydrocarbon-degrading potential. Methods: Four petroleum hydrocarbon-degrading bacterial strains, S4P2, S14P1, S9D2, and S13D1, were isolated and used to screen the activity of catalase, lipases, and catechol 1, 2-dioxygenase. All the strains were characterized biochemically. The presence of catalase was studied using nutrient agar and absorbance was measured at 240 nm due to the disappearance of peroxide. Qualitatively, the presence of lipase was studied on tributyrin agar (TBA) plates. The lipase activity was quantified using the titrimetric method. The activity of catechol 1, 2-dioxygenase (C12O) was screened by the formation of the product cis, cis-muconic acid (CCMA) by measuring the absorbance at 260 nm. Findings: Bacterial strains S4P2, S14P1, S9D2, and S13D1 showed clear halo zones around TBA plates, indicating lipase activity. Similarly, quantitively lipase activity was highest in S4P2 (0.034±0.01 U/ml) and S13D1 (0.027±0.01 U/ml) followed by S9D2 (0.024±0.01 U/ml) and S14P1 (0.024±0.01 U/ml) respectively. The presence of catalase was confirmed by effervescence after the addition of H2O2 on cultured nutrient agar, quantitative screening was performed by checking the decrease in absorbance at 240 nm. The maximum activity was observed in isolates S9D2 and S14P1. The total catechol 1, 2-dioxygenase activity was found to be 18.48±0 U/ml and 8.96±0.56 U/ml in S9D2 and S13D1. In contrast, S14P1 and S4P2 showed 12.88±0.56 U/ml and 16. 8±0.U/ml. Novelty: Microbial enzymes play an important role in the degradation of hydrocarbons. The direct application of microbes offers many constraints, so the use of these enzymes as a cocktail may be a solution for bioremediation. In the present study, we aimed to elucidate the enzymes responsible for hydrocarbon degradation in previously unreported strains, Pseudomonas donghuensis and Azospirillum zeae. Therefore, this enzyme can be used as a bioremediation agent for petroleum-contaminated sites.

Keywords: Petroleum; Catalase; Lipases; Catechol 1,2-dioxygenase; Hydrocarbons

References

  1. CTD, GECR, AHA, EAA, LBZ, JCLU, et al. Oil Bioremediation in a Tropical Contaminated Soil Using a Reactor. Anais da Academia Brasileira de Ciências. 2020;92(2):1–18. Available from: https://dx.doi.org/10.1590/0001-3765202020181396
  2. Kanwal M, Ullah H, Gulzar A, Sadiq T, Gul Z, Ullah M, et al. Biodegradation of petroleum hydrocarbons and the factors effecting rate of biodegradation. American Journal of Biomedical Science and Research. 2022;16(1):6–15. Available from: http://dx.doi.org/10.34297/AJBSR.2022.16.002182
  3. Srimathi M, Suganthi M, Sugitha S, Kumar KA, Ramprasath C, Abirami G. Characterization of Crude Oil Degrading Marine Bacterium Bacillus licheniformis. Indian Journal of Microbiology. 2024;p. 1–3. Available from: https://dx.doi.org/10.1007/s12088-024-01222-9
  4. Radhakrishnan A, Balaganesh P, Vasudevan M, Natarajan N, Chauhan A, Arora J, et al. Bioremediation of Hydrocarbon Pollutants: Recent Promising Sustainable Approaches, Scope, and Challenges. Sustainability. 2023;15(7):1–18. Available from: https://dx.doi.org/10.3390/su15075847
  5. Bekele GK, Gebrie SA, Abda EM, Sinshaw G, Haregu S, Negie ZW, et al. Kerosene Biodegradation by Highly Efficient Indigenous Bacteria Isolated From Hydrocarbon-Contaminated Sites. Microbiology Insights. 2023;16:1–9. Available from: https://dx.doi.org/10.1177/11786361221150759
  6. Pandolfo E, Caracciolo AB, Rolando L. Recent Advances in Bacterial Degradation of Hydrocarbons. Water. 2023;15(2):1–18. Available from: https://dx.doi.org/10.3390/w15020375
  7. Hossain MF, Akter A, Sohan MSR, Sultana N, Reza MA, Hoque KMF. Bioremediation potential of hydrocarbon degrading bacteria: isolation, characterization, and assessment. Saudi Journal of Biological Sciences. 2022;29(1):211–216. Available from: https://dx.doi.org/10.1016/j.sjbs.2021.08.069
  8. Tondo ML, Pedro-Jové Rd, Vandecaveye A, Piskulic L, Orellano EG, Valls M. KatE From the Bacterial Plant Pathogen Ralstonia solanacearum Is a Monofunctional Catalase Controlled by HrpG That Plays a Major Role in Bacterial Survival to Hydrogen Peroxide. Frontiers in Plant Science. 2020;11:1–12. Available from: https://dx.doi.org/10.3389/fpls.2020.01156
  9. Bamitale OM, Ayomikun AM. Biodegradation potential of tropical hydrocarbon degrading Providencia stuartii. Trends in Applied Sciences Research. 2020;15(3):253–259. Available from: https://scialert.net/abstract/?doi=tasr.2020.253.259
  10. Sarwade V, Funde S. Biotransformation of nitro aromatic amines in artificial alkaline habitat by pseudomonas DL17. Environmental Analysis Health and Toxicology. 2022;37(1):1–16. Available from: https://dx.doi.org/10.5620/eaht.2022001
  11. Gayathri V, Krishnaprema K. Bioremediation of Crude Oil using Hydrocarbon degrading Pseudomonas luteola by Immobilization methods. Ecology, Environment and Conservation. 2023;29(January Suppl. Issue):S109–S116. Available from: https://dx.doi.org/10.53550/eec.2023.v29i01s.017
  12. Xiao F, Zhou BB, Duan ML, Chen XP. Effect of Different Remediation Methods on the Degradation Rate of Petroleum Hydrocarbon and Enzyme Activity in Petroleum Contaminated Soil. Applied Ecology and Environmental Research. 2023;21(4):2819–2832. Available from: https://dx.doi.org/10.15666/aeer/2104_28192832
  13. Jacob EL, Mohan AP, Joseph AV. Bioremediation of Petroleum-Polluted Soil Using Biosurfactant Producing Bacteria, Pseudomonas sp. Journal of Scientific Research. 2022;66(1):224–231. Available from: https://dx.doi.org/10.37398/jsr.2022.660124
  14. Layly IR, Meryandini A, Helianti I, Astuti RI. Identification of lipase producing bacteria from palm oil sewage sludge processing plant at Malimping, Banten, Indonesia. Biodiversitas Journal of Biological Diversity. 2021;22(10):4512–4524. Available from: https://dx.doi.org/10.13057/biodiv/d221045
  15. Szymczak T, Cybulska J, Podleśny M, Frąc M. Various Perspectives on Microbial Lipase Production Using Agri-Food Waste and Renewable Products. Agriculture. 2021;11(6):1–22. Available from: https://dx.doi.org/10.3390/agriculture11060540
  16. Abubakar A, Abioye OP, Aransiola SA, Maddela NR, Prasad R. Crude oil biodegradation potential of lipase produced by Bacillus subtilis and Pseudomonas aeruginosa isolated from hydrocarbon contaminated soil. Environmental Chemistry and Ecotoxicology. 2024;6:26–32. Available from: https://dx.doi.org/10.1016/j.enceco.2023.12.001
  17. Pozdnyakova-Filatova I, Petrikov K, Vetrova A, Frolova A, Streletskii R, Zakharova M. The Naphthalene Catabolic Genes of Pseudomonas putida BS3701: Additional Regulatory Control. Frontiers in Microbiology. 2020;11:1–12. Available from: https://dx.doi.org/10.3389/fmicb.2020.01217
  18. Lee GLY, Zakaria NN, Convey P, Futamata H, Zulkharnain A, Suzuki K, et al. Statistical Optimisation of Phenol Degradation and Pathway Identification through Whole Genome Sequencing of the Cold-Adapted Antarctic Bacterium, Rhodococcus sp. Strain AQ5-07. International Journal of Molecular Sciences. 2020;21(24):1–20. Available from: https://doi.org/10.3390/ijms21249363
  19. Amran R, Jamal MT, Pugazhendi A, Al-Harbi M, Ghandourah M, Al-Otaibi A, et al. Biodegradation and Bioremediation of Petroleum Hydrocarbons in Marine Ecosystems by Microorganisms: A Review. Nature Environment and Pollution Technology. 2022;21(3):1149–1157. Available from: https://dx.doi.org/10.46488/nept.2022.v21i03.019

Copyright

© 2024 Nanekar & Kokitkar. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Published By Indian Society for Education and Environment (iSee)

DON'T MISS OUT!

Subscribe now for latest articles and news.